src/hg/encode/validateFiles/validateFiles.c 1.11

Index: src/hg/encode/validateFiles/validateFiles.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/validateFiles/validateFiles.c,v
retrieving revision 1.10
retrieving revision 1.11
diff -b -B -U 4 -r1.10 -r1.11
--- src/hg/encode/validateFiles/validateFiles.c	13 Mar 2009 23:00:02 -0000	1.10
+++ src/hg/encode/validateFiles/validateFiles.c	13 Mar 2009 23:23:51 -0000	1.11
@@ -54,13 +54,14 @@
   "         csqual    : Colorspace quality (see link below)\n"
   "                     (see http://marketing.appliedbiosystems.com/mk/submit/SOLID_KNOWLEDGE_RD?_JS=T&rd=dm)\n"
   "\n"
   "   -chromInfo=file.txt          Specify chromInfo file to validate chrom names and sizes\n"
-  "   -colorSpace                  Sequences are colorspace 0-3 values\n"
+  "   -colorSpace                  Sequences include colorspace values [0-3] (can be used \n"
+  "                                  with formats such as tagAlign and pairedTagAlign)\n"
   "   -maxErrors=N                 Maximum lines with errors to report in one file before \n"
   "                                  stopping (default %d)\n"
   "   -zeroSizeOk                  For BED-type positional data, allow rows with start==end\n"
-  "                                  otherwise require start < end\n"
+  "                                  otherwise require strictly start < end\n"
   "   -printOkLines                Print lines which pass validation to stdout\n"
   "   -printFailLines              Print lines which fail validation to stdout\n"
   "   -version                     Print version\n"
   , MAX_ERRORS);