src/hg/makeDb/doc/droMoj2.txt 1.4

1.4 2009/03/16 21:20:35 angie
LiftOver to dm3 for genome list q.
Index: src/hg/makeDb/doc/droMoj2.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/droMoj2.txt,v
retrieving revision 1.3
retrieving revision 1.4
diff -b -B -U 4 -r1.3 -r1.4
--- src/hg/makeDb/doc/droMoj2.txt	21 Aug 2006 21:36:29 -0000	1.3
+++ src/hg/makeDb/doc/droMoj2.txt	16 Mar 2009 21:20:35 -0000	1.4
@@ -672,4 +672,15 @@
     egrep -v '^(track|browser) ' DroMoj_20050801.gff \
     | ldHgGene -gtf droMoj2 geneMapper stdin
 
 
+###########################################################################
+# LIFTOVER TO DROMOJ3 (DONE 3/16/09 angie)
+    doSameSpeciesLiftOver.pl droMoj2 droMoj3 -debug \
+      -ooc=/hive/data/staging/data/droMoj2/11.ooc -workhorse=kolossus
+# *** Steps were performed in /hive/data/genomes/droMoj2/bed/blat.droMoj3.2009-03-16
+    cd /hive/data/genomes/droMoj2/bed/blat.droMoj3.2009-03-16/
+    doSameSpeciesLiftOver.pl droMoj2 droMoj3 \
+      -ooc=/hive/data/staging/data/droMoj2/11.ooc -workhorse=kolossus
+
+
+###########################################################################