kate: changes by file

branch to review (2009-03-10 to 2009-03-17) v202

• src/hg/lib/hui.c
  • 1.171 lines changed: 2, context: html, text, full: html, text
    Revert last change -- we need to wait till the RNA data submissions quiet down first
  • 1.170 lines changed: 4, context: html, text, full: html, text
    Move ENCODE downloads down a directory level
  • 1.169 lines changed: 1, context: html, text, full: html, text
    The Q-value is log after all
• src/hg/lib/encode/broadPeak.as
  • 1.4 lines changed: 1, context: html, text, full: html, text
    The Q-value is log after all
• src/hg/lib/encode/encodePeak.as
  • 1.6 lines changed: 1, context: html, text, full: html, text
    The Q-value is log after all
• src/hg/lib/encode/narrowPeak.as
  • 1.4 lines changed: 1, context: html, text, full: html, text
    The Q-value is log after all
• src/hg/makeDb/trackDb/human/hg18/trackDb.ra
  • 1.383 lines changed: 79, context: html, text, full: html, text
    Keep configuration panel on by default for SUNY track
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.212 lines changed: 1, context: html, text, full: html, text
    Add settings config for SUNY track
  • 1.210 lines changed: 4, context: html, text, full: html, text
    Adjust SUNY track labels and subtrack config for usability
  • 1.208 lines changed: 4, context: html, text, full: html, text
    Expand cell type in label, at request of Peggy Farnham
  • 1.206 lines changed: 39, context: html, text, full: html, text
    Turn on K562 experiments by default, to beef up track
  • 1.205 lines changed: 7, context: html, text, full: html, text
    Darken color for Hek cell line a bit, at Q/A request
• src/hg/makeDb/trackDb/human/hg18/wgEncodeSunyalbanyRnaGeneChip.html
  • 1.10 lines changed: 39, context: html, text, full: html, text
    Edited for clarity