src/hg/blastToPsl/tests/makefile 1.17

1.17 2009/04/12 03:47:20 markd
added support for PSI BLAST madness
Index: src/hg/blastToPsl/tests/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/blastToPsl/tests/makefile,v
retrieving revision 1.16
retrieving revision 1.17
diff -b -B -U 4 -r1.16 -r1.17
--- src/hg/blastToPsl/tests/makefile	22 Aug 2007 02:49:47 -0000	1.16
+++ src/hg/blastToPsl/tests/makefile	12 Apr 2009 03:47:20 -0000	1.17
@@ -6,9 +6,10 @@
 all:
 
 test:	protMrnaTest protDnaTest mrnaDnaTest mrnaDnaxTest \
 	blockBugTest identityBugTest protMrnaEval1Test protMrnaEval2Test \
-	longDbNameTest multiLineDescTest tblastxTest tblastnTest
+	longDbNameTest multiLineDescTest tblastxTest tblastnTest \
+	blastpPsiTest
 
 #tblastnDbFirstTest megaBlastTest
 
 protMrnaTest: mkdirs
@@ -99,8 +100,15 @@
 	${blastToPsl} input/970.blast output/$@.psl
 	pslCheck -verbose=0 output/$@.psl
 	diff -u expected/$@.psl output/$@.psl
 
+# PSI-BLASTP 
+blastpPsiTest: mkdirs
+	${blastToPsl} -scores=output/$@.bscores input/blastpPsi.blast output/$@.psl
+	pslCheck -verbose=0 output/$@.psl
+	diff -u expected/$@.psl output/$@.psl
+	diff -u expected/$@.bscores output/$@.bscores
+
 clean::
 	rm -rf output
 
 mkdirs: