src/hg/blastToPsl/tests/makefile 1.18

1.18 2009/04/12 05:48:42 markd
fixed bug parsing PSI BLAST output with no hits
Index: src/hg/blastToPsl/tests/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/blastToPsl/tests/makefile,v
retrieving revision 1.17
retrieving revision 1.18
diff -b -B -U 4 -r1.17 -r1.18
--- src/hg/blastToPsl/tests/makefile	12 Apr 2009 03:47:20 -0000	1.17
+++ src/hg/blastToPsl/tests/makefile	12 Apr 2009 05:48:42 -0000	1.18
@@ -7,9 +7,9 @@
 
 test:	protMrnaTest protDnaTest mrnaDnaTest mrnaDnaxTest \
 	blockBugTest identityBugTest protMrnaEval1Test protMrnaEval2Test \
 	longDbNameTest multiLineDescTest tblastxTest tblastnTest \
-	blastpPsiTest
+	blastpPsiTest psiNoHitsTest
 
 #tblastnDbFirstTest megaBlastTest
 
 protMrnaTest: mkdirs
@@ -107,8 +107,15 @@
 	pslCheck -verbose=0 output/$@.psl
 	diff -u expected/$@.psl output/$@.psl
 	diff -u expected/$@.bscores output/$@.bscores
 
+# PSI-BLASTP with no hits
+psiNoHitsTest: mkdirs
+	${blastToPsl} -scores=output/$@.bscores input/psiNoHits.blast output/$@.psl
+	pslCheck -verbose=0 output/$@.psl
+	diff -u expected/$@.psl output/$@.psl
+	diff -u expected/$@.bscores output/$@.bscores
+
 clean::
 	rm -rf output
 
 mkdirs: