src/utils/qa/checkGbdb.csh 1.7

1.7 2009/04/11 00:37:01 rhead
Sourced new qaConfig file at the top. Changed -h hgwbeta lines to look for sql host stored in a variable, specified in the new qaConfig file.
Index: src/utils/qa/checkGbdb.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/checkGbdb.csh,v
retrieving revision 1.6
retrieving revision 1.7
diff -b -B -U 4 -r1.6 -r1.7
--- src/utils/qa/checkGbdb.csh	24 Mar 2009 19:10:43 -0000	1.6
+++ src/utils/qa/checkGbdb.csh	11 Apr 2009 00:37:01 -0000	1.7
@@ -1,5 +1,6 @@
 #!/bin/tcsh
+source `which qaConfig.csh`
 
 ####################
 #  07-09-04 Bob Kuhn
 #
@@ -35,9 +36,9 @@
 rm -f $output
 rm -f $output2
 
 # get assembly list from beta
-hgsql -h hgwbeta -N -e "SELECT name FROM dbDb" hgcentralbeta \
+hgsql -h $sqlbeta -N -e "SELECT name FROM dbDb" hgcentralbeta \
    | sort | grep -v ci1 | grep -v zoo  > xxAssembliesxx
 echo "all" >> xxAssembliesxx
 
 # error checking for db name on command line