src/utils/qa/getChromFieldName.csh 1.2

1.2 2009/04/11 00:37:03 rhead
Sourced new qaConfig file at the top. Changed -h hgwbeta lines to look for sql host stored in a variable, specified in the new qaConfig file.

Index: src/utils/qa/getChromFieldName.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/getChromFieldName.csh,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/utils/qa/getChromFieldName.csh	21 Sep 2007 20:40:22 -0000	1.1
+++ src/utils/qa/getChromFieldName.csh	11 Apr 2009 00:37:03 -0000	1.2
@@ -1,39 +1,40 @@
 #!/bin/tcsh
+source `which qaConfig.csh`
 
 ###############################################
 #  09-20-07
 # 
 #  Finds the proper column names if "chrom", "tName" or "genoName".'
 # 
 ###############################################
 
 set db=""
 set table=""
 set chr=""
 
 if ( $#argv != 2 ) then
   echo
   echo '  Finds the proper column names if "chrom", "tName" or "genoName".'
   echo
   echo "    usage:  database, table"
   echo
   exit
 else
   set db=$argv[1]
   set table=$argv[2]
 endif
 
 if ( "$HOST" != "hgwdev" ) then
  echo "\n error: you must run this script on dev!\n"
  exit 1
 endif
 
 set chr=`hgsql -N -e "DESC $table" $db | gawk '{print $1}' | egrep -w "chrom|tName|genoName"`
 if ($status) then
   echo '\n  '$db.$table' has no "chrom", "tName" or "genoName" fields.\n'
   echo ${0}:
   $0
   exit 1 
 endif 
 echo $chr
 exit