src/utils/qa/getRRdumpfile.csh 1.3
1.3 2009/04/11 00:37:04 rhead
Sourced new qaConfig file at the top. Changed -h hgwbeta lines to look for sql host stored in a variable, specified in the new qaConfig file.
Index: src/utils/qa/getRRdumpfile.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/getRRdumpfile.csh,v
retrieving revision 1.2
retrieving revision 1.3
diff -b -B -U 1000000 -r1.2 -r1.3
--- src/utils/qa/getRRdumpfile.csh 16 Feb 2006 01:12:01 -0000 1.2
+++ src/utils/qa/getRRdumpfile.csh 11 Apr 2009 00:37:04 -0000 1.3
@@ -1,82 +1,83 @@
#!/bin/tcsh
+source `which qaConfig.csh`
################################
# 01-01-05
# gets the filename of the TABLE STATUS dump from RR
# using mark's genbank dumps.
#
# Robert Kuhn
################################
set database=""
set rootpath="/cluster/data/genbank/var/tblstats" # mark's TABLE STATUS dump
set machine="hgw1"
set dirname=""
set machpath=""
set fullpath=""
set dumpfile=""
if ( $#argv < 1 | $#argv > 2 ) then
echo
echo " gets the filename of the TABLE STATUS dump from RR"
echo " using mark's genbank dumps."
echo " warning: not in real time. uses overnight dump."
echo
echo " usage: database, [RRmachine] (defaults to hgw1)"
echo
exit
else
set database=$argv[1]
endif
if ( $#argv == 2 ) then
set machine=$argv[2]
endif
# check for valid machines
checkMachineName.csh $machine
if ( $status ) then
exit 1
endif
# set path to directory of dated dumps for the proper machine
set machpath=$rootpath/$machine
if (! -e $machpath ) then
echo
echo " $machpath does not exist."
echo
exit 1
endif
# set path to latest stored TABLE STATUS dumps
set dirname=`ls -1 $machpath | tail -1`
set fullpath=$machpath/$dirname
set dumpfile=$fullpath/$database.tbls
if (! -e $dumpfile ) then
echo
echo " database $database -- does not exist on $machine"
echo
exit 1
else
echo $dumpfile
endif
set debug="false"
# set debug="true"
if ( $debug == "true" ) then
echo
echo "database = $database"
echo "machine = $machine"
echo
echo "machpath = $machpath"
echo "fullpath = $fullpath"
echo "dumpfile = $dumpfile"
echo
# exit
endif
exit