src/hg/hgTables/microarrayTables.c 1.2
1.2 2009/04/10 20:04:29 tdreszer
Fix many instances of using composite tdb when subtrack tdb is needed
Index: src/hg/hgTables/microarrayTables.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgTables/microarrayTables.c,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/hgTables/microarrayTables.c 17 Mar 2009 10:13:27 -0000 1.1
+++ src/hg/hgTables/microarrayTables.c 10 Apr 2009 20:04:29 -0000 1.2
@@ -1,43 +1,37 @@
/* Stuff to handle microarray tables */
#include "common.h"
#include "hash.h"
#include "linefile.h"
#include "trackDb.h"
#include "customTrack.h"
#include "microarray.h"
#include "hgTables.h"
-boolean isMicroarray(struct trackDb *curTrack, char *table)
+boolean isMicroarray(struct trackDb *parent, char *table)
/* Return TRUE if table is specified as a microarray in the current database's
* trackDb. */
{
-if (curTrack && sameString(curTrack->tableName, table))
- return (startsWith("expRatio", curTrack->type) || startsWith("array", curTrack->type));
-else
- {
- struct trackDb *tdb = hTrackDbForTrack(database, table);
- return (tdb && (startsWith("expRatio", tdb->type) || startsWith("array", tdb->type)));
- }
-return FALSE;
+struct trackDb *tdb = findTdbForTable(database, parent, table);
+return (tdb && (startsWith("expRatio", tdb->type) || startsWith("array", tdb->type)));
}
void doOutMicroarrayNames(struct trackDb *tdb)
/* Show the microarray names from .ra file */
{
struct microarrayGroups *allGroups = maGetTrackGroupings(database, tdb);
if (allGroups)
{
struct maGrouping *allArrays = allGroups->allArrays;
int i;
if (allArrays)
{
textOpen();
printf("#expId\tname\n");
for (i = 0; i < allArrays->size; i++)
{
printf("%d\t%s\n", allArrays->expIds[i], allArrays->names[i]);
}
}
}
}