src/hg/makeDb/schema/all.joiner 1.705

1.705 2009/04/21 19:53:57 hiram
Fixup rules for hg19 non-split tables and ignore gold
Index: src/hg/makeDb/schema/all.joiner
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/schema/all.joiner,v
retrieving revision 1.704
retrieving revision 1.705
diff -b -B -U 4 -r1.704 -r1.705
--- src/hg/makeDb/schema/all.joiner	17 Apr 2009 00:28:48 -0000	1.704
+++ src/hg/makeDb/schema/all.joiner	21 Apr 2009 19:53:57 -0000	1.705
@@ -1025,8 +1025,14 @@
     $gbd.chainSelf.id $split
     $gbd.chainSelfLink.chainId $split full
     $gbd.netSelf.chainId exclude=0
 
+identifier chainSelfNonSplit
+"Link together self chain info"
+    hg19.chainSelf.id
+    hg19.chainSelfLink.chainId full
+    hg19.netSelf.chainId exclude=0
+
 identifier chain[${chainDest}]Id
 "Link together chain info"
     $gbd.chain[].id $split
     $gbd.chain[]Link.chainId $split full
@@ -1128,8 +1134,15 @@
     sacCer2.intronEst.qName splitPrefix=%\_
     caeJap1.intronEst.qName 
     $gbd.estOrientInfo.name full 
 
+identifier nativeEstAccessionNonSplit typeOf=estAccession
+"Genbank Native (same organism as database) EST accession"
+    hg19.all_est.qName dupeOk
+    hg19.est.qName full 
+    hg19.intronEst.qName
+    hg19.estOrientInfo.name full 
+
 identifier xenoEstAccession typeOf=estAccession
 "Genbank xeno (different organism from database) EST accession"
     $gbd.xenoEst.qName dupeOk
 
@@ -2918,8 +2931,11 @@
     pbResAvgStd
     pbStamp
     pep%Dist
 
+tablesIgnored hg19
+    gold
+
 tablesIgnored $calJac
     gold
 
 tablesIgnored $petMar