src/hg/makeDb/schema/all.joiner 1.705
1.705 2009/04/21 19:53:57 hiram
Fixup rules for hg19 non-split tables and ignore gold
Index: src/hg/makeDb/schema/all.joiner
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/schema/all.joiner,v
retrieving revision 1.704
retrieving revision 1.705
diff -b -B -U 4 -r1.704 -r1.705
--- src/hg/makeDb/schema/all.joiner 17 Apr 2009 00:28:48 -0000 1.704
+++ src/hg/makeDb/schema/all.joiner 21 Apr 2009 19:53:57 -0000 1.705
@@ -1025,8 +1025,14 @@
$gbd.chainSelf.id $split
$gbd.chainSelfLink.chainId $split full
$gbd.netSelf.chainId exclude=0
+identifier chainSelfNonSplit
+"Link together self chain info"
+ hg19.chainSelf.id
+ hg19.chainSelfLink.chainId full
+ hg19.netSelf.chainId exclude=0
+
identifier chain[${chainDest}]Id
"Link together chain info"
$gbd.chain[].id $split
$gbd.chain[]Link.chainId $split full
@@ -1128,8 +1134,15 @@
sacCer2.intronEst.qName splitPrefix=%\_
caeJap1.intronEst.qName
$gbd.estOrientInfo.name full
+identifier nativeEstAccessionNonSplit typeOf=estAccession
+"Genbank Native (same organism as database) EST accession"
+ hg19.all_est.qName dupeOk
+ hg19.est.qName full
+ hg19.intronEst.qName
+ hg19.estOrientInfo.name full
+
identifier xenoEstAccession typeOf=estAccession
"Genbank xeno (different organism from database) EST accession"
$gbd.xenoEst.qName dupeOk
@@ -2918,8 +2931,11 @@
pbResAvgStd
pbStamp
pep%Dist
+tablesIgnored hg19
+ gold
+
tablesIgnored $calJac
gold
tablesIgnored $petMar