src/hg/makeDb/trackDb/esRegGeneToMotif.html 1.5

1.5 2009/04/27 17:22:08 katrina
Edited link to Eran Segal's website
Index: src/hg/makeDb/trackDb/esRegGeneToMotif.html
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/esRegGeneToMotif.html,v
retrieving revision 1.4
retrieving revision 1.5
diff -b -B -U 1000000 -r1.4 -r1.5
--- src/hg/makeDb/trackDb/esRegGeneToMotif.html	10 Jan 2005 07:37:19 -0000	1.4
+++ src/hg/makeDb/trackDb/esRegGeneToMotif.html	27 Apr 2009 17:22:08 -0000	1.5
@@ -1,32 +1,32 @@
 <H2>Description</H2>
 <P>
 This track shows predicted transcription factor binding sites 
 based on sequence similarities upstream of coordinately expressed genes.
 <P>
 In dense display mode the gold areas indicate the extent of the area
 searched for binding sites; black boxes indicate the actual
 binding sites. In other modes the gold areas disappear and only
 the binding sites are displayed. Clicking on a particular predicted binding 
 site displays a page that shows the sequence motif associated with the 
 predicted transcription factor and the sequence at the predicted binding site.
 Where known motifs have been identified by this method, they are named;
 otherwise, they are assigned a motif number.
 
 <H2>Methods</H2>
 <P>
 This analysis was performed according to 
 <A HREF="http://cs.stanford.edu/~eran/publications/segal_promoters.pdf"
 TARGET=_blank>Genome-wide discovery of transcriptional modules from DNA 
 sequence and gene expression</A> on various pre-existing microarray datasets.
 A regulatory module is comprised of a set of genes predicted to be regulated 
 by the same combination of DNA sequence motifs. The predictions are based on 
 the co-expression of the set of genes in the module and on the appearance of
 common combinations of motifs in the upstream regions of genes assigned to
 the same module. 
 
 <H2>Credits</H2>
 <P>
-Thanks to <A HREF="http://robotics.stanford.edu/~erans/"
+Thanks to <A HREF="http://www.wisdom.weizmann.ac.il/~eran/"
 TARGET=_blank>Eran Segal</A> for providing the data analysis that forms the 
 basis for this track.  The display was programmed by 
 <A HREF="http://www.soe.ucsc.edu/~kent" TARGET=_blank>Jim Kent</A>.