src/inc/bigBed.h 1.12

1.12 2009/04/20 23:16:18 mikep
Index: src/inc/bigBed.h
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/inc/bigBed.h,v
retrieving revision 1.11
retrieving revision 1.12
diff -b -B -U 4 -r1.11 -r1.12
--- src/inc/bigBed.h	16 Mar 2009 18:34:46 -0000	1.11
+++ src/inc/bigBed.h	20 Apr 2009 23:16:18 -0000	1.12
@@ -62,6 +62,18 @@
 	char *asFileName, /* If non-null points to a .as file that describes fields. */
 	char *outName);   /* BigBed output file name. */
 /* Convert tab-separated bed file to binary indexed, zoomed bigBed version. */
 
+void bigBedFileCreateDetailed(
+	char *inName, 	  /* Input file in a tabular bed format <chrom><start><end> + whatever. */
+	boolean sorted,	  /* Input is already sorted */
+	char *chromSizes, /* Two column tab-separated file: <chromosome> <size>. */
+	int blockSize,	  /* Number of items to bundle in r-tree.  1024 is good. */
+	int itemsPerSlot, /* Number of items in lowest level of tree.  64 is good. */
+	bits16 definedFieldCount,  /* Number of defined bed fields - 3-16 or so.  0 means all fields
+				    * are the defined bed ones. */
+	char *asFileName, /* If non-null points to a .as file that describes fields. */
+	char *outName);   /* BigBed output file name. */
+/* Convert tab-separated bed file to binary indexed, zoomed bigBed version. */
+
 #endif /* BIGBED_H */