angie: changes by file

review to branch (2009-05-19 to 2009-05-26) v207

• src/hg/hgTrackUi/hgTrackUi.c
  • 1.489 lines changed: 3, context: html, text, full: html, text
    Added by-1000genomes validation string for dbSNP 130.
• src/hg/hgc/hgc.c
  • 1.1545 lines changed: 2, context: html, text, full: html, text
    Increased string size for snp125 observed allele (blob not varchar!).
• src/hg/lib/snp125Ui.c
  • 1.32 lines changed: 12, context: html, text, full: html, text
    Added by-1000genomes validation string for dbSNP 130.
• src/hg/snp/snpLoad/snpNcbiToUcsc.c
  • 1.10 lines changed: 93, context: html, text, full: html, text
    Added -1000GenomesRsIds for adding our own by-1000genomes validation status using a flatfile of 1000Genomes IDs from dbSNP. Also, treat NULL like MISSING, for input from one big sql query instead of from little queries and join commands.
• src/hg/utils/refreshNamedSessionCustomTracks/refreshNamedSessionCustomTracks.c
  • 1.10 lines changed: 22, context: html, text, full: html, text
    Instead of processing the hgcentral query of session info row by row, slurp the results into memory and then process. Hopefully this will reduce the frequency of losing the connection to hgcentral (currently 4x/day).