hiram: changes by file

review to branch (2009-05-19 to 2009-05-26) v207

• src/hg/makeDb/doc/hg18.txt
  • 1.362 lines changed: 126, context: html, text, full: html, text
    Added updates to phastCons44way and Elements, six tables updated
• src/hg/makeDb/doc/hg19.txt
  • 1.18 lines changed: 58, context: html, text, full: html, text
    Running some recip bests, and started Medaka oryLat2
  • 1.17 lines changed: 330, context: html, text, full: html, text
    Fugu Fr2, Bushbaby OtoGar1 lastz done, Baboon PapHam1 running, SGP and GeneID Genes loaded. 4-way multiz done for UCSC gene build
• src/hg/makeDb/doc/mm9.txt
  • 1.94 lines changed: 21, context: html, text, full: html, text
    Swap to hg19 lastz done
• src/hg/makeDb/schema/all.joiner
  • 1.715 lines changed: 62, context: html, text, full: html, text
    Fixup hg19 so it is much cleaner
• src/hg/makeDb/trackDb/human/hg18/trackDb.ra
  • 1.393 lines changed: 6, context: html, text, full: html, text
    Updated phastCons44way tables and elements to new version from Adam's lab
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • 1.19 lines changed: 24, context: html, text, full: html, text
    Add multiz4way for UCSC Genes construction