src/hg/makeDb/doc/aplCal1.txt 1.8

Index: src/hg/makeDb/doc/aplCal1.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/aplCal1.txt,v
retrieving revision 1.7
retrieving revision 1.8
diff -b -B -U 4 -r1.7 -r1.8
--- src/hg/makeDb/doc/aplCal1.txt	9 Jun 2009 07:00:26 -0000	1.7
+++ src/hg/makeDb/doc/aplCal1.txt	9 Jun 2009 07:15:08 -0000	1.8
@@ -511,4 +511,13 @@
     #	aplCal1 does not have seq
     #	aplCal1 does not have extFile
     ssh hgwbeta hgsql -h hgsqlbeta qapushq < /hive/data/genomes/aplCal1/pushQ/aplCal1.pushQ.sql
 
+    # Then, look at file(s) named in each of the following
+    # wiggle tables and added these to the files section of qapushq.aplCal1
+    # queue table:
+          hgsql aplCal1 -e 'select distinct(file) from gc5Base'
+          hgsql aplCal1 -e 'select distinct(file) from quality'
+
+    # added to all.joiner both $gbd and $chainDest
+
+