src/hg/makeDb/trackDb/rmsk.html 1.21
1.21 2009/06/04 22:02:04 katrina
Clarified the Repeat Masker track description
Index: src/hg/makeDb/trackDb/rmsk.html
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/rmsk.html,v
retrieving revision 1.20
retrieving revision 1.21
diff -b -B -U 4 -r1.20 -r1.21
--- src/hg/makeDb/trackDb/rmsk.html 2 Aug 2007 20:57:24 -0000 1.20
+++ src/hg/makeDb/trackDb/rmsk.html 4 Jun 2009 22:02:04 -0000 1.21
@@ -4,11 +4,14 @@
HREF="http://www.repeatmasker.org/"
TARGET=_blank>RepeatMasker</A> program, which screens DNA sequences
for interspersed repeats and low complexity DNA sequences. The program
outputs a detailed annotation of the repeats that are present in the
-query sequence, as well as a modified version of the query sequence
-in which all the annotated repeats have been masked. RepeatMasker uses
-the <A HREF="http://www.girinst.org/Repbase_Update.html"
+query sequence (represented by this track), as well as a modified version
+of the query sequence in which all the annotated repeats have been masked
+(generally available on the
+<A HREF="http://hgdownload.cse.ucsc.edu/downloads.html"
+TARGET=_BLANK>Downloads</A> page). RepeatMasker uses the
+<A HREF="http://www.girinst.org/Repbase_Update.html"
TARGET=_blank>RepBase</A> library of repeats from the
<A HREF="http://www.girinst.org/" TARGET=_blank>Genetic
Information Research Institute</A> (GIRI).
RepBase is described in Jurka, J. (2000) in the References section below.</P>