tdreszer: changes by commit

review to branch (2009-06-02 to 2009-06-09) v208

• Rearranged a little and added subtrackCBsSetAll() for 'allButtonPair' tdb setting
  • src/hg/js/hui.js 1.29 - lines changed: 33, context: html, text, full: html, text
• Added support for 'allButtonPair' UI
  • src/hg/lib/hui.c 1.208 - lines changed: 23, context: html, text, full: html, text
• Added allButtonPair and hopefully clarified some details
  • src/hg/makeDb/trackDb/README 1.76 - lines changed: 89, context: html, text, full: html, text
• Added Broad's alignability track
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeMapability.html 1.3 - lines changed: 21, context: html, text, full: html, text
• Added Broad's alignability track to the Mapability composite
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.331 - lines changed: 36, context: html, text, full: html, text
• Tarjei requested a credit change
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeMapability.html 1.4 - lines changed: 1, context: html, text, full: html, text
• Tarjei requested windowFunction=mean on his alignability track
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.332 - lines changed: 1, context: html, text, full: html, text
• And alignability should be selected by default
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.333 - lines changed: 1, context: html, text, full: html, text
• Overkill with the drip drip drip of changes
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.334 - lines changed: 1, context: html, text, full: html, text
• Mark caught my sloppy code. vsprintf replaced with vsnprintf()
  • src/lib/htmshell.c 1.51 - lines changed: 1, context: html, text, full: html, text
• Angie's review found <DD>s where there should be </DD>s. I bet this is in other description pages as well. But it is really not a worry.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeChromatinMap.html 1.9 - lines changed: 9, context: html, text, full: html, text
• Added Bryal Lajoie's uniqueness track
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.338 - lines changed: 40, context: html, text, full: html, text
• Added Bryan Lajoie's uniqueness track
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeMapability.html 1.5 - lines changed: 22, context: html, text, full: html, text
• Minor typos
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.339 - lines changed: 6, context: html, text, full: html, text
• Added a bunch of new antibodies
  • src/hg/encode/encodeValidate/config/cv.ra 1.104 - lines changed: 53, context: html, text, full: html, text
• Added a batch of cell lines
  • src/hg/encode/encodeValidate/config/cv.ra 1.105 - lines changed: 78, context: html, text, full: html, text
• Missing type
  • src/hg/encode/encodeValidate/config/cv.ra 1.106 - lines changed: 1, context: html, text, full: html, text
• Missing orderUrl's
  • src/hg/encode/encodeValidate/config/cv.ra 1.107 - lines changed: 31, context: html, text, full: html, text
• Did I happen to mention how much I hate updating cv.ra?
  • src/hg/encode/encodeValidate/config/cv.ra 1.108 - lines changed: 2, context: html, text, full: html, text
• Added type treatment with 4 treatments for Yale
  • src/hg/encode/encodeValidate/config/cv.ra 1.109 - lines changed: 21, context: html, text, full: html, text
• Adder controlde vocam term 'treatment'
  • src/hg/encode/encodeValidate/doEncodeValidate.pl 1.182 - lines changed: 1, context: html, text, full: html, text
• Added STAT2 for Yale
  • src/hg/encode/encodeValidate/config/cv.ra 1.110 - lines changed: 8, context: html, text, full: html, text
• Fixed STAT1 url
  • src/hg/encode/encodeValidate/config/cv.ra 1.111 - lines changed: 1, context: html, text, full: html, text
• Added tracks for Yale amd cleaned up a lot of obsolete settings
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.340 - lines changed: 2159, context: html, text, full: html, text