angie: changes by commit

branch to review (2009-05-26 to 2009-06-02) v207

• Added snp130 basic tables.
  • src/hg/makeDb/doc/hg18.txt 1.363 - lines changed: 484, context: html, text, full: html, text
• Added snp130.
  • src/hg/makeDb/schema/all.joiner 1.716 - lines changed: 16, context: html, text, full: html, text
• Added boxedCfg on to bdtnpChipper (thanks Tim!).
  • src/hg/makeDb/trackDb/drosophila/trackDb.ra 1.75 - lines changed: 1, context: html, text, full: html, text
• Several more suggestions from Tim: get rid of dimZ FDR subgroup (redundant w/view), add sortOrder and dragAndDrop, and move type wig declaration from composite down into subtracks, so the composite-level controls will not be shown and view-level controls will work. Also broke down classes Anterior-posterior early and Dorsal-ventral into more detailed subclasses for proper sort ordering.
  • src/hg/makeDb/trackDb/drosophila/trackDb.ra 1.76 - lines changed: 153, context: html, text, full: html, text
• Changing bdntpChipper composite type back to wig instead of bed 3, which caused all subtracks to be drawn as bed3 not wig despite the wig subtrack types.
  • src/hg/makeDb/trackDb/drosophila/trackDb.ra 1.77 - lines changed: 1, context: html, text, full: html, text
• Fixing recently introduced bug -- missing left side & assignment.
  • src/hg/hgTracks/cds.c 1.97 - lines changed: 1, context: html, text, full: html, text
• More tricks from Tim: use noInherit on and settingsByView so hgTracks doesn't get misled by the composite type of bed3.
  • src/hg/makeDb/trackDb/drosophila/trackDb.ra 1.78 - lines changed: 7, context: html, text, full: html, text