src/utils/qa/doGenbankTests 1.13
1.13 2009/05/27 18:58:00 rhead
Simplified getting intronEst table names even further (and logic was backwards in last commit).
Index: src/utils/qa/doGenbankTests
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/doGenbankTests,v
retrieving revision 1.12
retrieving revision 1.13
diff -b -B -U 4 -r1.12 -r1.13
--- src/utils/qa/doGenbankTests 27 May 2009 18:41:25 -0000 1.12
+++ src/utils/qa/doGenbankTests 27 May 2009 18:58:00 -0000 1.13
@@ -84,14 +84,9 @@
fi
# specify tables that should get each test
# intronEst is a special case; it may exist only in split form
-if tableExists $db intronEst
-then
- intronEstTables=$(hgsql -Ne "show tables like '%intronEst'" $db)
-else
- intronEstTables=intronEst
-fi
+intronEstTables=$(hgsql -Ne "show tables like '%intronEst'" $db)
trackTables="refGene xenoRefGene mgcFullMrna orfeomeMrna all_mrna intronEst /
all_est xenoMrna xenoEst"
genePredTables="refGene xenoRefGene mgcGenes orfeomeGenes"
@@ -112,9 +106,9 @@
do
tableExists $db $table && getShortLabel $db $table
done
# intronEst is a special case; it may exist only in split form
-if ! tableExists $db intronEst # table is split
+if ! tableExists $db intronEst # table is split, but not in trackDb
then
getShortLabel $db intronEst
fi
echo