src/hg/hgc/hgc.c 1.1557
1.1557 2009/06/22 22:25:22 angie
Added note that HDGP geographical allele images may show alleles from the - strand (thanks David).
Index: src/hg/hgc/hgc.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/hgc.c,v
retrieving revision 1.1556
retrieving revision 1.1557
diff -b -B -U 4 -r1.1556 -r1.1557
--- src/hg/hgc/hgc.c 22 Jun 2009 21:50:30 -0000 1.1556
+++ src/hg/hgc/hgc.c 22 Jun 2009 22:25:22 -0000 1.1557
@@ -15064,9 +15064,12 @@
if ((row = sqlNextRow(sr)) != NULL)
{
struct hgdpGeo geo;
hgdpGeoStaticLoad(row+1, &geo);
- printf("<B>Human Genome Diversity Project SNP</B><BR>\n");
+ printf("<BR><B>Human Genome Diversity Project SNP</B><BR>\n");
+ printf("Note: These annotations are taken directly from the "
+ "<A HREF=\"http://hgdp.uchicago.edu/\" TARGET=_BLANK>HGDP Selection Browser</A>, "
+ "and may indicate the allele on the opposite strand from that given above.<BR>\n");
printf("<B>Ancestral Allele:</B> %c<BR>\n", geo.ancestralAllele);
printf("<B>Derived Allele:</B> %c<BR>\n", geo.derivedAllele);
printf("<TABLE><TR><TD>\n");
hgdpGeoFreqTable(&geo);