src/hg/makeDb/trackDb/README 1.79
1.79 2009/06/22 21:50:31 angie
Added new SNP-specific setting defaultGeneTracks, to enable functional annotations of SNPs relative to some gene track(s).
Index: src/hg/makeDb/trackDb/README
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RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/README,v
retrieving revision 1.78
retrieving revision 1.79
diff -b -B -U 4 -r1.78 -r1.79
--- src/hg/makeDb/trackDb/README 17 Jun 2009 19:05:52 -0000 1.78
+++ src/hg/makeDb/trackDb/README 22 Jun 2009 21:50:31 -0000 1.79
@@ -468,8 +468,10 @@
o codingAnnotations table1,table2,... - each table describes
changes in a particular gene set's coding sequence caused by SNPs.
o codingAnnoLabel_<tableN> - proper name of geneSet for tableN in
codingAnnotations' table list
+ o defaultGeneTracks table1,table2,... - hgc shows functional annotations
+ of SNPs relative to these genePred tracks by default.
o hapmapPhase {II,III} - older tracks used HapMap Phase II data
collected in a table "hapmapAllelesSummary". Newer tracks use
hapmapSnps* tables directly.