src/hg/makeDb/trackDb/snp129.html 1.7

1.7 2009/06/22 17:37:12 kuhn
removed some comments about comparing to previous versions
Index: src/hg/makeDb/trackDb/snp129.html
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/snp129.html,v
retrieving revision 1.6
retrieving revision 1.7
diff -b -B -U 4 -r1.6 -r1.7
--- src/hg/makeDb/trackDb/snp129.html	29 Nov 2008 20:00:33 -0000	1.6
+++ src/hg/makeDb/trackDb/snp129.html	22 Jun 2009 17:37:12 -0000	1.7
@@ -63,24 +63,19 @@
       <B>Function</B>: Predicted functional role 
 	(<I>each variant may have more than one functional role</I>)<BR>
       <UL>
         <LI><B>Locus Region</B> - variation within 2000 bases of gene, but not 
-	    in transcript (in build 127 and before, the keyword was 
-	    <TT>locus</TT>, but since build 128, the more specific terms 
-	    <TT>near-gene-3</TT> and <TT>near-gene-5</TT> are used)
+	    in transcript (<TT>near-gene-3</TT>, <TT>near-gene-5</TT>)
         <LI><B>Coding - Synonymous</B> - no change in peptide for allele with 
 	    respect to reference assembly (<TT>coding-synon</TT>)
         <LI><B>Coding - Non-Synonymous</B> - change in peptide for allele with 
-	    respect to reference assembly (<TT>coding-nonsynon</TT> in build 
-	    127; <TT>nonsense</TT>, <TT>missense</TT>, <TT>frameshift</TT> 
-	    since build 128)
+	    respect to reference assembly (<TT>nonsense</TT>, <TT>missense</TT>, 
+            <TT>frameshift</TT>)
         <LI><B>Untranslated</B> - variation in transcript, but not in coding 
-	    region interval (<TT>untranslated</TT> in build 127; 
-	    <TT>untranslated-3</TT>, <TT>untranslated-5</TT> since build 128)
+	    region interval (<TT>untranslated-3</TT>, <TT>untranslated-5</TT>)
         <LI><B>Intron</B> - variation in intron, but not in first two or last two bases of intron
         <LI><B>Splice Site</B> - variation in first two or last two bases of 
-	    intron (<TT>splice-site</TT> in build 127; <TT>splice-3</TT>, 
-	    <TT>splice-5</TT> since build 128)
+	    intron (<TT>splice-3</TT>, <TT>splice-5</TT>)
         <LI><B>Reference (coding)</B> - allele observed in a coding region of 
 	    the reference sequence (<TT>cds-reference</TT>)
         <LI><B>Unknown</B> - no known functional classification
       </UL>