src/hg/makeDb/trackDb/snp130.html 1.5
1.5 2009/06/22 18:02:19 angie
Added clarification for meaning of cds-reference / "Reference (coding)".
Index: src/hg/makeDb/trackDb/snp130.html
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/snp130.html,v
retrieving revision 1.4
retrieving revision 1.5
diff -b -B -U 4 -r1.4 -r1.5
--- src/hg/makeDb/trackDb/snp130.html 22 Jun 2009 17:57:30 -0000 1.4
+++ src/hg/makeDb/trackDb/snp130.html 22 Jun 2009 18:02:19 -0000 1.5
@@ -76,10 +76,10 @@
region interval (<TT>untranslated-3</TT>, <TT>untranslated-5</TT>)
<LI><B>Intron</B> - variation in intron, but not in first two or last two bases of intron
<LI><B>Splice Site</B> - variation in first two or last two bases of
intron (<TT>splice-3</TT>, <TT>splice-5</TT>)
- <LI><B>Reference (coding)</B> - allele observed in a coding region of
- the reference sequence (<TT>cds-reference</TT>)
+ <LI><B>Reference (coding)</B> - one of the observed alleles of a SNP
+ in a coding region matches the reference assembly (<TT>cds-reference</TT>)
<LI><B>Unknown</B> - no known functional classification
</UL>
</LI>
<LI>