src/hg/hgc/hgc.c 1.1556
1.1556 2009/06/22 21:50:30 angie
Added new SNP-specific setting defaultGeneTracks, to enable functional annotations of SNPs relative to some gene track(s).
Index: src/hg/hgc/hgc.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/hgc.c,v
retrieving revision 1.1555
retrieving revision 1.1556
diff -b -B -U 4 -r1.1555 -r1.1556
--- src/hg/hgc/hgc.c 16 Jun 2009 06:17:38 -0000 1.1555
+++ src/hg/hgc/hgc.c 22 Jun 2009 21:50:30 -0000 1.1556
@@ -14847,9 +14847,15 @@
char varName[512];
safef(varName, sizeof(varName), "%s_geneTrack", tdb->tableName);
struct slName *geneTracks = cartOptionalSlNameList(cart, varName);
if (geneTracks == NULL)
+ {
+ char *defaultGeneTracks = trackDbSetting(tdb, "defaultGeneTracks");
+ if (isNotEmpty(defaultGeneTracks))
+ geneTracks = slNameListFromComma(defaultGeneTracks);
+ else
return;
+ }
struct sqlConnection *conn = hAllocConn(database);
struct slName *gt;
printf("<BR><B>UCSC's predicted function relative to selected gene tracks:</B>\n");
printf("<TABLE BORDERWIDTH=0>\n");