rhead: changes by file

review to branch (2009-06-16 to 2009-06-23) v209

• src/hg/makeDb/trackDb/human/hg18/encodeUCDavisChip.html
  • 1.2 lines changed: 2, context: html, text, full: html, text
    Changed crosslink to cross-link to be consistent everywhere.
• src/hg/makeDb/trackDb/human/hg18/encodeUcDavisChipHits.html
  • 1.3 lines changed: 1, context: html, text, full: html, text
    Changed crosslink to cross-link to be consistent everywhere.
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.354 lines changed: 10, context: html, text, full: html, text
    Added release alpha back to Open Chromatin raw signal tracks.
  • 1.353 lines changed: 58, context: html, text, full: html, text
    Removed release alphas for initial release of Open Chromatin track.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeBroadChipSeq.html
  • 1.14 lines changed: 3, context: html, text, full: html, text
    Changed crosslink to cross-link to be consistent everywhere.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeChromatinMap.html
  • 1.20 lines changed: 1, context: html, text, full: html, text
    Forgot a line break.
  • 1.19 lines changed: 51, context: html, text, full: html, text
    More edits after consulting Tim and Kate. Added a reference and links to protocols.
  • 1.18 lines changed: 32, context: html, text, full: html, text
    Edits to References section.
  • 1.17 lines changed: 31, context: html, text, full: html, text
    Lots of minor grammar/punctuation/consistency edits. Put Credits in a list. Made quotes html-friendly.
  • 1.16 lines changed: 167, context: html, text, full: html, text
    Whitespace changes.
• src/hg/makeDb/trackDb/human/hg18/wgEncodeDukeDnase.html
  • 1.5 lines changed: 3, context: html, text, full: html, text
    Changed crosslink to cross-link to be consistent everywhere.
• src/hg/makeDb/trackDb/marmoset/calJac1/description.html
  • 1.9 lines changed: 3, context: html, text, full: html, text
    Updated links to WUSTL.
• src/hg/makeDb/trackDb/mouse/igtc.html
  • 1.5 lines changed: 1, context: html, text, full: html, text
    Changed tigem link to location to which it was being redirected.
• src/utils/qa/makefile
  • 1.109 lines changed: 1, context: html, text, full: html, text
    Added removeAlphas.
• src/utils/qa/removeAlphas
  • 1.1 lines changed: 35, context: html, text, full: html, text
    Initial commit. Thanks, markd!