src/hg/lib/gbSeq.sql 1.1

1.1 2009/07/04 07:14:20 markd
added some .h files for genbank tables
Index: src/hg/lib/gbSeq.sql
===================================================================
RCS file: src/hg/lib/gbSeq.sql
diff -N src/hg/lib/gbSeq.sql
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/lib/gbSeq.sql	4 Jul 2009 07:14:20 -0000	1.1
@@ -0,0 +1,19 @@
+# gbSeq.sql was originally generated by the autoSql program, which also 
+# generated gbSeq.c and gbSeq.h.  This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly 
+# automatic way.
+
+#Information about sequences contained in files described in gbExtFile
+CREATE TABLE gbSeq (
+    id int unsigned not null,	# ID/index
+    acc varchar(255) not null,	# Accession of sequence
+    version int not null,	# Genbank version
+    size int unsigned not null,	# Size of sequence (number of bases)
+    gbExtFile int unsigned not null,	# ID/index of file in gbExtFile
+    file_offset bigint not null,	# byte offset of sequence in file
+    file_size int unsigned not null,	# byte size of sequence in file
+    type enum("EST", "mRNA", "PEP")  not null,	# Type of sequence
+    srcDb enum("GenBank", "RefSeq", "Other")  not null,	# Source database
+              #Indices
+    PRIMARY KEY(id)
+);