src/hg/archaeStuff/scripts/make-browser-2.0 1.42

Index: src/hg/archaeStuff/scripts/make-browser-2.0
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/archaeStuff/scripts/make-browser-2.0,v
retrieving revision 1.41
retrieving revision 1.42
diff -b -B -U 4 -r1.41 -r1.42
--- src/hg/archaeStuff/scripts/make-browser-2.0	3 May 2009 04:44:56 -0000	1.41
+++ src/hg/archaeStuff/scripts/make-browser-2.0	29 Jun 2009 04:30:35 -0000	1.42
@@ -72,9 +72,9 @@
 
 # Program option variables
 our ($opt_getseqs, $opt_joinassembly, $opt_initdb, $opt_hidedb, $opt_droptable, $opt_initblat, $opt_gc, $opt_repeats, $opt_iselements,
  $opt_desc, $opt_info, $opt_pfam, $opt_scanpfam, $opt_swissprot, $opt_pfamdesc,
- $opt_syncg,$opt_synct,$opt_syncd, $opt_syncc, $opt_loaddump, $opt_allorg,$opt_snapshot,
+ $opt_syncg,$opt_synct,$opt_syncd, $opt_syncc, $opt_syncdw, $opt_loaddump, $opt_allorg,$opt_snapshot,
  $opt_genes, $opt_gbhits, $opt_genepred, $opt_cogs, $opt_kegg, $opt_gbrnas, $opt_trnas, $opt_snornas,$opt_auth,
  $opt_rfam, $opt_tigr, $opt_jgi, $opt_easy, $opt_startblat, $opt_killblat, $opt_blatscript, $opt_selfz, $opt_multiz, $opt_ultracons,
  $opt_plfold, $opt_pldensity, $opt_custwig, $opt_wiki, $opt_wikibme, $opt_promsd, $opt_term, $opt_stringdb,
  $opt_arkops, $opt_tigrops, $opt_commit, $opt_perm, $opt_tracksup, $opt_altdb, $opt_primers,
@@ -149,8 +149,9 @@
     if ($opt_syncg)                { &Sync_genome_db(\%global_vars, "public"); }
     if ($opt_synct)                { &Sync_genome_db(\%global_vars, "test"); }
     if ($opt_syncd)                { &Sync_genome_db(\%global_vars, "dev"); }
     if ($opt_syncc)                { &Sync_genome_db(\%global_vars, "collab"); }
+    if ($opt_syncdw)               { &Sync_genome_db(\%global_vars, "download"); }
     if ($opt_swissprot ne '')      { &Load_swissprot_db(\%global_vars, $opt_swissprot); }
     if ($opt_pfamdesc)             { &Load_pfam_desc(\%global_vars); }
     if ($opt_snapshot ne '')       { &Get_snapshot(\%global_vars, $opt_auth);      }
     if ($opt_initblat)             { &Load_blat_info(\%global_vars);    }
@@ -383,9 +384,9 @@
     Getopt::Long::GetOptions("getseqs","joinassembly", "initdb","hidedb","droptable=s","initblat","gc","gbhits",
                  "repeats","iselements", "desc","info",
                  "pfam","scanpfam",
                  "genes","genepred","cogs","kegg","gbrnas","trnas","snornas","delete=s",
-                 "syncg","synct","syncd","syncc","loaddump", "swissprot=s", "pfamdesc",
+                 "syncg","synct","syncd","syncc","syncdw","loaddump", "swissprot=s", "pfamdesc",
                  "rfam","tigr","jgi","easy","startblat","killblat","blatscript","selfz","multiz", "ultracons",
                  "stringdb",
                  "plfold","pldensity","custwig=s","wiki", "wikibme","promsd","term","arkops","tigrops","auth=s",
                  "commit","perm","tracksup","altdb=s","primers","precomp=s","snapshot=s",
@@ -416,8 +417,9 @@
     "            --syncg     :  Synchronize /gbdb and mySql db for organism to public server\n",
     "            --synct     :  Synchronize /gbdb and mySql db for organism to testing server\n",
     "            --syncd     :  Synchronize /gbdb and mySql db for organism to development server\n",
     "            --syncc     :  Synchronize /gbdb and mySql db for organism to collaborative server\n",
+    "            --syncdw    :  Synchronize /gbdb and mySql db for organism to download server\n",
     "            --swissprot=<MMDDYYYY> :  Load swissprot data with release date of <MMDDYYYY>\n",
     "            --pfamdesc  :  Load Pfam description table into proteome database\n",
     "            --initblat  :  Initialize db for Blat Servers\n",
     "            --startblat :  Start blat server (will not start if already running)\n",
@@ -490,9 +492,9 @@
     $global_constants->snapshot_addr($opt_snapshot);
 
     if ($opt_public)
     {
-        if (!$global_constants->on_public() && !$global_constants->on_archtest())
+        if (!$global_constants->on_public() && !$global_constants->on_archtest() && !$global_constants->on_download())
         {
             die "Not on public/test web server.  Log into ".$global_constants->server_AR()->{public}." or ".
         $global_constants->server_AR()->{test}." and try again\n\n";
         }
@@ -507,9 +509,9 @@
         }
     }
     else
     {
-    if ($global_constants->on_public() || $global_constants->on_archtest())
+    if ($global_constants->on_public() || $global_constants->on_archtest() || $global_constants->on_download())
     {
         die "Must use --public when running on public or test server\n\n";
     }
     }