src/hg/makeDb/trackDb/transMap.html 1.13
1.13 2009/07/10 06:26:56 markd
updated description
Index: src/hg/makeDb/trackDb/transMap.html
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/transMap.html,v
retrieving revision 1.12
retrieving revision 1.13
diff -b -B -U 4 -r1.12 -r1.13
--- src/hg/makeDb/trackDb/transMap.html 9 Dec 2008 22:18:54 -0000 1.12
+++ src/hg/makeDb/trackDb/transMap.html 10 Jul 2009 06:26:56 -0000 1.13
@@ -10,9 +10,9 @@
<em>TransMap</em> maps genes and related annotations in one species to another
using synteny-filtered pairwise genome alignments (chains and nets) to
determine the most likely orthologs. For example, for the mRNA TransMap track
-on the human assembly, more than 400,000 mRNAs from 23 vertebrate species were
+on the human assembly, more than 400,000 mRNAs from 25 vertebrate species were
aligned at high stringency to the native assembly using BLAT. The alignments
were then mapped to the human assembly using the chain and net alignments
produced using blastz, which has higher sensitivity than BLAT for diverged
organisms.