src/hg/gigAssembler/checkOut/checkOut.c 1.3

Index: src/hg/gigAssembler/checkOut/checkOut.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/gigAssembler/checkOut/checkOut.c,v
retrieving revision 1.2
retrieving revision 1.3
diff -b -B -U 1000000 -r1.2 -r1.3
--- src/hg/gigAssembler/checkOut/checkOut.c	6 May 2003 07:22:15 -0000	1.2
+++ src/hg/gigAssembler/checkOut/checkOut.c	7 Jul 2009 18:44:57 -0000	1.3
@@ -1,70 +1,70 @@
 /* Check out - check directory to make sure it has
  * a .out file for each .fa file, and that .out file
  * is non-empty. */
 #include "common.h"
 #include "hash.h"
 #include "portable.h"
 
 static char const rcsid[] = "$Id$";
 
 void checkOut(char *dir)
 /* Check out - check directory to make sure it has
  * a .out file for each .fa file, and that .out file
  * is non-empty. */
 {
-char faName[512], outName[512];
+char outName[512];
 struct slName *outList, *outEl, *faList, *faEl;
 struct hash *outHash = newHash(16);
 boolean missingAny = FALSE, zeroAny = FALSE;
 
 printf("Listing *.fa.out\n");
 outList = listDir(dir, "*.fa.out");
 for (outEl = outList; outEl != NULL; outEl = outEl->next)
     hashAdd(outHash, outEl->name, NULL);
 printf("Listing *.fa\n");
 faList = listDir(dir, "*.fa");
 printf("Missing .out\n");
 for (faEl = faList; faEl != NULL; faEl = faEl->next)
     {
     sprintf(outName, "%s.out", faEl->name);
     if (!hashLookup(outHash, outName))
 	{
 	printf("%s\n", faEl->name);
 	missingAny = TRUE;
 	}
     }
 if (!missingAny)
     printf("  none\n");
 printf("Zero size .out\n");
 for (outEl = outList; outEl != NULL; outEl = outEl->next)
     {
     long size;
     sprintf(outName, "%s/%s", dir, outEl->name);
     size = fileSize(outName);
     if (size <= 0)
 	{
 	printf("%s\n", outEl->name);
 	zeroAny = TRUE;
 	}
     }
 if (!zeroAny)
     printf("  none\n");
 }
 
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort("checkOut - check to make sure all .fa files in a dir\n"
          "have a .fa.out file\n"
 	 "usage:\n"
 	 "   checkOut dir");
 }
 
 int main(int argc, char *argv[])
 {
 if (argc != 2)
     usage();
 checkOut(argv[1]);
 return 0;
 }