src/hg/makeDb/hgLoadBed/makefile 1.23
1.23 2009/07/15 19:43:10 mikep
fixing same problem with g+w, teh fiels are alrady this permission
Index: src/hg/makeDb/hgLoadBed/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/hgLoadBed/makefile,v
retrieving revision 1.22
retrieving revision 1.23
diff -b -B -U 1000000 -r1.22 -r1.23
--- src/hg/makeDb/hgLoadBed/makefile 15 Jul 2009 19:37:17 -0000 1.22
+++ src/hg/makeDb/hgLoadBed/makefile 15 Jul 2009 19:43:10 -0000 1.23
@@ -1,72 +1,68 @@
include ../../../inc/common.mk
L += -lm ${MYSQLLIBS}
MYLIBDIR = ../../../lib/${MACHTYPE}
MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
SQL_FILES = ../../lib/encode/encodePeak.sql
O = hgLoadBed.o
A = hgLoadBed
hgLoadBed: $O ${MYLIBS}
${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/${A} $O ${MYLIBS} $L
${STRIP} ${BINDIR}/hgLoadBed${EXE}
compile: ${O} ${MYLIBS}
${CC} ${COPT} ${CFLAGS} -o ${A} $O ${MYLIBS} $L
cgi:: compile
chmod a+rx $A${EXE}
@if [ ! -d "${CGI_BIN}-${USER}/loader" ]; then \
${MKDIR} ${CGI_BIN}-${USER}/loader; \
fi
rm -f ${CGI_BIN}-${USER}/loader/$A
mv $A${EXE} ${CGI_BIN}-${USER}/loader/$A
- chmod g+w ${SQL_FILES}
cp ${SQL_FILES} ${CGI_BIN}-${USER}/loader
alpha:: strip
@if [ ! -d "${CGI_BIN}/loader" ]; then \
${MKDIR} ${CGI_BIN}/loader; \
fi
rm -f ${CGI_BIN}/loader/$A
mv $A${EXE} ${CGI_BIN}/loader/$A
- chmod g+w ${SQL_FILES}
cp ${SQL_FILES} ${CGI_BIN}/loader
beta:: strip
@if [ ! -d "${CGI_BIN}-beta/loader" ]; then \
${MKDIR} ${CGI_BIN}-beta/loader; \
fi
rm -f ${CGI_BIN}-beta/loader/$A
mv $A${EXE} ${CGI_BIN}-beta/loader/$A
- chmod g+w ${SQL_FILES}
cp ${SQL_FILES} ${CGI_BIN}-beta/loader
strip:: compile
${STRIP} $A${EXE}
chmod g+w $A${EXE}
chmod a+rx $A${EXE}
install:: strip
@if [ ! -d "${DESTDIR}${CGI_BIN}/loader" ]; then \
${MKDIR} "${DESTDIR}${CGI_BIN}/loader"; \
fi
rm -f ${DESTDIR}${CGI_BIN}/loader/$A
mv $A${EXE} ${DESTDIR}${CGI_BIN}/loader/$A
- chmod g+w ${SQL_FILES}
cp ${SQL_FILES} ${DESTDIR}${CGI_BIN}/loader
debug:: $O
${CC} $O ${MYLIBS} ${L}
mv ${AOUT} $A${EXE}
clean::
rm -f $O $A${EXE} tests/bed.tab
test:
cd tests && ./RunTest.sh
test_verbose:
cd tests && ./RunTest.sh -verbose