src/hg/archaeStuff/data/Genome-info-mods 1.71

Index: src/hg/archaeStuff/data/Genome-info-mods
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/archaeStuff/data/Genome-info-mods,v
retrieving revision 1.70
retrieving revision 1.71
diff -b -B -U 4 -r1.70 -r1.71
--- src/hg/archaeStuff/data/Genome-info-mods	27 Jul 2009 18:17:48 -0000	1.70
+++ src/hg/archaeStuff/data/Genome-info-mods	28 Jul 2009 20:54:53 -0000	1.71
@@ -81,17 +81,17 @@
 DB_name:  halMar1
 Iso_pub: 11536469 
 Rel_date: Nov. 2004
 Sp_info: <I>H. marismortui</I> is a halophilic archaeon found in the Dead Sea, where it optimally grows at around 4.5 molar salt.
-Multiz:   Halophiles natrPhar1 haloWals1 haloVolc1 haloHalo1 haloSali1
-Phylo:    ((((haloHalo1,haloSali1),natrPhar1),halMar1),(haloWals1,haloVolc1))
+Multiz:   Halophiles natrPhar1 haloWals1 haloVolc1 natrMaga0 haloHalo1 haloSali1
+Phylo:    (((((haloHalo1,haloSali1),natrMaga0),natrPhar1),halMar1),(haloWals1,haloVolc1))
 
 Org_abr:  Halo_sp
 DB_name:  haloHalo1
 Rel_date: Oct 2000
 Sp_info: <I>Halobacterium</I> is a halophilic aerobic euryarchaeon found under conditions of extremely high salinity, at an optimum of 4.3M salt.  It is a mesophile which grows optimally at 42C.  A well-developed genetic system is available for this species. 
-Multiz:   Halophiles haloSali1 haloVolc1 natrPhar1 haloWals1 halMar1   
-Phylo:    ((((haloHalo1,haloSali1),natrPhar1),halMar1),(haloWals1,haloVolc1))
+Multiz:   Halophiles haloSali1 natrMaga0 haloVolc1 natrPhar1 haloWals1 halMar1   
+Phylo:    (((((haloHalo1,haloSali1),natrMaga0),natrPhar1),halMar1),(haloWals1,haloVolc1))
 SP_ID:    HALSA
 
 Org_abr:  Halo_sali_R1
 Menu_name: Halobacterium salinarum R1
@@ -99,20 +99,20 @@
 Rel_date: Feb 2008
 Seq_src:  Max Planck Institute
 SP_ID:    HALSA
 Iso_pub: 
-Multiz:   Halophiles haloHalo1 haloVolc1 natrPhar1 haloWals1 halMar1   
-Phylo:    ((((haloHalo1,haloSali1),natrPhar1),halMar1),(haloWals1,haloVolc1))
+Multiz:   Halophiles haloHalo1 natrMaga0 haloVolc1 natrPhar1 haloWals1 halMar1   
+Phylo:    (((((haloHalo1,haloSali1),natrMaga0),natrPhar1),halMar1),(haloWals1,haloVolc1))
 
 Org_abr:  Halo_wals
 Rel_date: 07/25/06
 Seq_src: Max-Planck-Institute of Biochemistry and the University of Groningen
 Pub_id: 16820047
 DB_name: haloWals1
 #Iso_pub: 15560825
 SP_ID:    HALWD HALMA HALSP NATPD 
-Multiz:   Halophiles haloVolc1 halMar1 natrPhar1 haloHalo1 haloSali1 
-Phylo:    ((((haloHalo1,haloSali1),natrPhar1),halMar1),(haloWals1,haloVolc1))
+Multiz:   Halophiles haloVolc1 halMar1 natrPhar1 natrMaga0 haloHalo1 haloSali1 
+Phylo:    (((((haloHalo1,haloSali1),natrMaga0),natrPhar1),halMar1),(haloWals1,haloVolc1))
 
 Org_abr:  Halo_volc_DS2
 Org_name: Haloferax volcanii DS2
 Menu_name: Haloferax volcanii
@@ -133,11 +133,10 @@
 Seq_size:  2847757 635786 437906 85092 6359
 Seq_GC:  66.64 61.67 65.56 55.5 56.06
 Gene_ct:  4209
 Gb_acc:   None
-Multiz:   Halophiles haloWals1 natrPhar1 haloHalo1 haloSali1 halMar1  
-Phylo:    ((((haloHalo1,haloSali1),natrPhar1),halMar1),(haloWals1,haloVolc1))
-
+Multiz:   Halophiles haloWals1 natrPhar1 natrMaga0 haloHalo1 haloSali1 halMar1  
+Phylo:    (((((haloHalo1,haloSali1),natrMaga0),natrPhar1),halMar1),(haloWals1,haloVolc1))
 Pub_id:   
 Rel_date: April 2007
 Seq_src:  Institute for Genomic Research
 Sp_info: The genome is complete and being publicly released by Jonathan Eisen before journal publication while genome annotation is in progress.  <I>H. volcanii</I> is a chemoorganotroph requiring complex nutrient medium and 1.5-2.5 M NaCl for growth. Cultures will grow at 37C, but optimal growth is at 42C. 
@@ -151,10 +150,10 @@
 DB_name:  natrPhar1
 Iso_pub: 
 Rel_date: Oct 2005
 Sp_info: <I>N. pharaonis</I>  grows at high salt and pH and has multiple systems for nitrogen assimilation. 
-Multiz:   Halophiles haloWals1 haloHalo1 haloSali1 haloVolc1 halMar1  
-Phylo:    ((((haloHalo1,haloSali1),natrPhar1),halMar1),(haloWals1,haloVolc1))
+Multiz:   Halophiles haloWals1 haloHalo1 natrMaga0 haloSali1 haloVolc1 halMar1  
+Phylo:    (((((haloHalo1,haloSali1),natrMaga0),natrPhar1),halMar1),(haloWals1,haloVolc1))
 
 Org_abr:  Meth_jann
 DB_name:  methJann1
 Iso_pub: http://www.springerlink.com/content/u8774k126821777x/