src/hg/hgc/makefile 1.62

1.62 2009/07/28 15:57:40 angie
Added rudimentary click handler for bam tracks (Heng Li's alignment format).

Index: src/hg/hgc/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/makefile,v
retrieving revision 1.61
retrieving revision 1.62
diff -b -B -U 4 -r1.61 -r1.62
--- src/hg/hgc/makefile	12 Jun 2009 07:21:29 -0000	1.61
+++ src/hg/hgc/makefile	28 Jul 2009 15:57:40 -0000	1.62
@@ -2,12 +2,15 @@
 
 L += -lm ${MYSQLLIBS} 
 MYLIBDIR = ../../lib/${MACHTYPE}
 MYLIBS =  ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
+ifeq (${USE_BAM},1)
+    MYLIBS += ${SAMPATH}/libbam.a
+endif
 
 A = hgc
 
-O = $A.o bigBedClick.o cgapSageClick.o encodeClick.o expClick.o mafClick.o \
+O = $A.o bamClick.o bigBedClick.o cgapSageClick.o encodeClick.o expClick.o mafClick.o \
 	hgdpClick.o regMotif.o wiggleClick.o retroClick.o \
 	lowelab.o rnaFoldClick.o transMapClick.o txCdsInfo.o \
 	ccdsClick.o mgcClick.o dbRIP.o wikiTrack.o virusClick.o