aamp: changes by commit

review to branch (2009-07-27 to 2009-08-04) v212

• Added stuff for first cut of the UW Southerns track.
  • src/hg/hgc/hgc.c 1.1562 - lines changed: 20, context: html, text, full: html, text
  • src/hg/inc/hui.h 1.136 - lines changed: 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.464 - lines changed: 13, context: html, text, full: html, text
• Added a couple more Agilent arrays to that composite track.
  • src/hg/makeDb/doc/hg18.txt 1.372 - lines changed: 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/agilentProbes.html 1.7 - lines changed: 21, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra 1.466 - lines changed: 26, context: html, text, full: html, text
• Added a couple rules for Agilent arrays.
  • src/hg/makeDb/schema/all.joiner 1.728 - lines changed: 2, context: html, text, full: html, text
• Fix to previous two Agilent Arrays track load. Faked two extra columns to make it bed 6.
  • src/hg/makeDb/doc/hg18.txt 1.373 - lines changed: 4, context: html, text, full: html, text
• Added lifted version of Agilent Probes track to hg19.
  • src/hg/makeDb/doc/hg19.txt 1.33 - lines changed: 31, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra 1.467 - lines changed: 1, context: html, text, full: html, text
• Added lifted version of Agilent Probes track to hg19. track override for group. HTML has an extra methods section explaining the lift along with a downloads link.
  • src/hg/makeDb/trackDb/human/hg19/agilentProbes.html 1.1 - lines changed: 158, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra 1.41 - lines changed: 3, context: html, text, full: html, text
• Added hg19 lifted version of Agilent Probes track.
  • src/hg/makeDb/trackDb/human/hg18/agilentProbes.html 1.1 - lines changed: 150, context: html, text, full: html, text
• Added a couple lines for genbank zip-file creation on hgdownload.
  • src/hg/makeDb/genbank/etc/genbank.conf 1.344 - lines changed: 2, context: html, text, full: html, text