src/utils/qa/chainNetTrio.csh 1.10

1.10 2009/07/31 18:50:35 kuhn
added a little prtective logic for when the otherOrg does not have an assembly (chromInfo)

Index: src/utils/qa/chainNetTrio.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/chainNetTrio.csh,v
retrieving revision 1.9
retrieving revision 1.10
diff -b -B -U 4 -r1.9 -r1.10
--- src/utils/qa/chainNetTrio.csh	1 Jul 2009 23:30:16 -0000	1.9
+++ src/utils/qa/chainNetTrio.csh	31 Jul 2009 18:50:35 -0000	1.10
@@ -27,8 +27,12 @@
 # just in case
 set table=`echo $table | perl -wpe '$_ = ucfirst($_)'`
 
 set split=`getSplit.csh $db chain$table hgwdev`
+if ( $status ) then
+  echo "\n\n $split \n"
+  exit 1
+endif
 
 if ( $split == "unsplit" ) then
   # run the three scripts in order
   nice chain.csh  $db chain$table      >& $db.chain.$table