src/hg/hgTracks/hgTracks.h 1.186

1.186 2009/07/27 19:31:48 angie
Added option (trackDb setting pairEndsByName) to join separate BAM records for paired ends into linkedFeaturesSeries paired-end items.

Index: src/hg/hgTracks/hgTracks.h
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgTracks/hgTracks.h,v
retrieving revision 1.185
retrieving revision 1.186
diff -b -B -U 4 -r1.185 -r1.186
--- src/hg/hgTracks/hgTracks.h	24 Jun 2009 20:33:03 -0000	1.185
+++ src/hg/hgTracks/hgTracks.h	27 Jul 2009 19:31:48 -0000	1.186
@@ -907,8 +907,13 @@
 
 int linkedFeaturesSeriesCmp(const void *va, const void *vb);
 /* Compare to sort based on chrom,chromStart. */
 
+void linkedFeaturesSeriesDraw(struct track *tg, int seqStart, int seqEnd,
+			      struct hvGfx *hvg, int xOff, int yOff, int width,
+			      MgFont *font, Color color, enum trackVisibility vis);
+/* Draw linked features series items. */
+
 struct linkedFeaturesSeries *lfsFromColoredExonBed(struct bed *bed);
 /* Convert a single BED 14 thing into a special linkedFeaturesSeries */
 /* where each linkedFeatures is a colored block. */