src/hg/overlapSelect/tests/makefile 1.32

1.32 2009/07/22 07:01:29 markd
fixed bug when doing stranded overlap with psls
Index: src/hg/overlapSelect/tests/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/overlapSelect/tests/makefile,v
retrieving revision 1.31
retrieving revision 1.32
diff -b -B -U 4 -r1.31 -r1.32
--- src/hg/overlapSelect/tests/makefile	14 Jan 2009 00:21:21 -0000	1.31
+++ src/hg/overlapSelect/tests/makefile	22 Jul 2009 07:01:29 -0000	1.32
@@ -27,9 +27,10 @@
 	idMatchTests \
 	rangeTests \
 	cds_id_out_gp \
 	wideTest \
-	name2EmptyTest
+	name2EmptyTest \
+	orthoStrandTest
 
 ###
 # selecting PSLs
 ###
@@ -743,8 +744,12 @@
 	${OVERSEL} input/name2Empty.gp input/name2Empty.gp output/$@.gp
 	genePredCheck -verbose=0 output/$@.gp
 	${DIFF} expected/$@.gp output/$@.gp
 
+# psl strand regression
+orthoStrandTest: mkout
+	${OVERSEL} -strand -aggregate -statsOutputAll input/orthoSel.psl input/orthoIn.gp output/$@.stats
+	${DIFF} expected/$@.stats output/$@.stats
 
 mkout:
 	@${MKDIR} output