src/hg/makeDb/trackDb/trackDb.ra 1.524

1.524 2009/08/11 16:53:38 hiram
Adding tetNig2 chain and net composite
Index: src/hg/makeDb/trackDb/trackDb.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.ra,v
retrieving revision 1.523
retrieving revision 1.524
diff -b -B -U 4 -r1.523 -r1.524
--- src/hg/makeDb/trackDb/trackDb.ra	30 Jul 2009 17:36:30 -0000	1.523
+++ src/hg/makeDb/trackDb/trackDb.ra	11 Aug 2009 16:53:38 -0000	1.524
@@ -2072,8 +2072,46 @@
 spectrum on
 type netAlign fr2 chainFr2
 otherDb fr2
 
+track tetNig2ChainNet
+compositeTrack on
+shortLabel Tetraodon Chain/Net
+longLabel Tetraodon (Mar. 2007/tetNig2), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+visibilityViewDefaults chain=pack net=dense
+group compGeno
+noInherit on
+priority 159
+color 0,0,0
+altColor 255,255,0
+type bed 3
+settingsByView chain:spectrum=on
+sortOrder view=+
+matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
+matrixHeader A, C, G, T
+otherDb tetNig2
+chainMinScore 5000
+chainLinearGap loose
+spectrum on
+html chainNet
+
+    track chainTetNig2
+    subTrack tetNig2ChainNet
+    subGroups view=chain
+    shortLabel $o_Organism Chain
+    longLabel $o_Organism ($o_date/$o_db) Chained Alignments
+    type chain tetNig2
+
+    track netTetNig2
+    subTrack tetNig2ChainNet
+    subGroups view=net
+    shortLabel $o_Organism Net
+    longLabel $o_Organism ($o_date/$o_db) Alignment Net
+    type netAlign tetNig2 chainTetNig2
+
 track chainTetNig1
 shortLabel $o_Organism Chain
 longLabel $o_Organism ($o_date/$o_db) Chained Alignments
 group compGeno
@@ -2112,9 +2150,9 @@
 settingsByView chain:spectrum=on
 sortOrder view=+
 matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
 matrixHeader A, C, G, T
-otherDb galGal3
+otherDb danRer6
 chainMinScore 5000
 chainLinearGap loose
 spectrum on
 html chainNet