src/hg/makeDb/trackDb/trackDb.ra 1.524
1.524 2009/08/11 16:53:38 hiram
Adding tetNig2 chain and net composite
Index: src/hg/makeDb/trackDb/trackDb.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.ra,v
retrieving revision 1.523
retrieving revision 1.524
diff -b -B -U 4 -r1.523 -r1.524
--- src/hg/makeDb/trackDb/trackDb.ra 30 Jul 2009 17:36:30 -0000 1.523
+++ src/hg/makeDb/trackDb/trackDb.ra 11 Aug 2009 16:53:38 -0000 1.524
@@ -2072,8 +2072,46 @@
spectrum on
type netAlign fr2 chainFr2
otherDb fr2
+track tetNig2ChainNet
+compositeTrack on
+shortLabel Tetraodon Chain/Net
+longLabel Tetraodon (Mar. 2007/tetNig2), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+visibilityViewDefaults chain=pack net=dense
+group compGeno
+noInherit on
+priority 159
+color 0,0,0
+altColor 255,255,0
+type bed 3
+settingsByView chain:spectrum=on
+sortOrder view=+
+matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
+matrixHeader A, C, G, T
+otherDb tetNig2
+chainMinScore 5000
+chainLinearGap loose
+spectrum on
+html chainNet
+
+ track chainTetNig2
+ subTrack tetNig2ChainNet
+ subGroups view=chain
+ shortLabel $o_Organism Chain
+ longLabel $o_Organism ($o_date/$o_db) Chained Alignments
+ type chain tetNig2
+
+ track netTetNig2
+ subTrack tetNig2ChainNet
+ subGroups view=net
+ shortLabel $o_Organism Net
+ longLabel $o_Organism ($o_date/$o_db) Alignment Net
+ type netAlign tetNig2 chainTetNig2
+
track chainTetNig1
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
group compGeno
@@ -2112,9 +2150,9 @@
settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
-otherDb galGal3
+otherDb danRer6
chainMinScore 5000
chainLinearGap loose
spectrum on
html chainNet