src/hg/hgc/hgc.c 1.1568

1.1568 2009/08/28 17:40:45 hartera
Added code to geneShowPosAndLinks() to write that there is no protein prediction for Vega gene if it is noncoding instead of having the sequence link.

Index: src/hg/hgc/hgc.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/hgc.c,v
retrieving revision 1.1567
retrieving revision 1.1568
diff -b -B -U 4 -r1.1567 -r1.1568
--- src/hg/hgc/hgc.c	28 Aug 2009 17:30:56 -0000	1.1567
+++ src/hg/hgc/hgc.c	28 Aug 2009 17:40:45 -0000	1.1568
@@ -2306,8 +2306,13 @@
         if (sameString(geneTable, "ensGene"))
 	    {
 	    printf("No protein prediction for Ensembl gene");
 	    }
+        else if ((sameString(geneTable, "vegaGene")) || (sameString(geneTable, "vegaPseudoGene")))
+	    {
+	    printf("No protein prediction for Vega gene");
+	    }
+             
 	else if (!genbankIsRefSeqNonCodingMRnaAcc(geneName))
 	    {
 	    hgcAnchorSomewhere("htcTranslatedPredMRna", geneName,
 		"translate", seqName);