src/hg/lib/hdb.c 1.411

1.411 2009/08/31 19:10:49 markd
converted gbSeq related sqlTableExists to hTableExists
Index: src/hg/lib/hdb.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/lib/hdb.c,v
retrieving revision 1.410
retrieving revision 1.411
diff -b -B -U 4 -r1.410 -r1.411
--- src/hg/lib/hdb.c	20 Aug 2009 18:11:36 -0000	1.410
+++ src/hg/lib/hdb.c	31 Aug 2009 19:10:49 -0000	1.411
@@ -1353,9 +1353,9 @@
                             HGID *retId, HGID *retExtId, size_t *retSize, off_t *retOffset)
 /* lookup information in the seq or gbSeq table */
 {
 boolean gotIt = FALSE;
-if (sqlTableExists(conn, seqTbl))
+if (hTableExists(sqlGetDatabase(conn), seqTbl))
     {
     char query[256];
     safef(query, sizeof(query),
        "select id, %s, file_offset, file_size from %s where acc = '%s'",
@@ -1499,17 +1499,17 @@
 struct sqlConnection *conn = hAllocConn(db);
 boolean haveSeq = FALSE;
 
 /* Check compatTable if we have it, otherwise check seq and gbSeq */
-if ((compatTable != NULL) && sqlTableExists(conn, compatTable))
+if ((compatTable != NULL) && hTableExists(db, compatTable))
     {
     haveSeq = checkIfInTable(conn, acc, "name", compatTable);
     }
 else
     {
-    if (sqlTableExists(conn, "gbSeq"))
+    if (hTableExists(db, "gbSeq"))
         haveSeq = checkIfInTable(conn, acc, "acc", "gbSeq");
-    if ((!haveSeq) && sqlTableExists(conn, "seq"))
+    if ((!haveSeq) && hTableExists(db, "seq"))
         haveSeq = checkIfInTable(conn, acc, "acc", "seq");
     }
 
 hFreeConn(&conn);
@@ -1549,9 +1549,9 @@
 struct dnaSeq *seq = NULL;
 
 /* If we have the compat table, get the sequence from there, otherwise from
  * seq or gbSeq. */
-if ((compatTable != NULL) && sqlTableExists(conn, compatTable))
+if ((compatTable != NULL) && hTableExists(sqlGetDatabase(conn), compatTable))
     {
     seq = loadSeqFromTable(conn, acc, compatTable);
     }
 else
@@ -1595,9 +1595,9 @@
 
 
 /* If we have the compat table, get the sequence from there, otherwise from
  * gbSeq. */
-if ((compatTable != NULL) && sqlTableExists(conn, compatTable))
+if ((compatTable != NULL) && hTableExists(sqlGetDatabase(conn), compatTable))
     {
     seq = loadSeqFromTable(conn, acc, compatTable);
     }
 else