galt: changes by file

review to branch (2009-08-25 to 2009-09-02) v214

• src/makefile
  • 1.62 lines changed: 1, context: html, text, full: html, text
    adding bedGraphToBigWig
• src/hg/encode/encodeStatus/encodeStatus.pl
  • 1.9 lines changed: 1, context: html, text, full: html, text
    migrate to new mysqlbeta db server
• src/hg/encode/encodeValidate/makefile
  • 1.18 lines changed: 1, context: html, text, full: html, text
    fix stray perl -c output
• src/hg/inc/jksql.h
  • 1.84 lines changed: 16, context: html, text, full: html, text
    adding some handy comments
• src/hg/inc/versionInfo.h
  • 1.154 lines changed: 1, context: html, text, full: html, text
    "New version number v214"
• src/hg/lib/cart.c
  • 1.112 lines changed: 2, context: html, text, full: html, text
    do not need sqlTableOk now that sqlTableExists works right with innodb and myisam both
• src/hg/lib/hgSeq.c
  • 1.40 lines changed: 1, context: html, text, full: html, text
    making output more infomative
• src/hg/lib/jksql.c
  • 1.133 lines changed: 45, context: html, text, full: html, text
    added useful comments, put in fastest method found to determine if a table exists, added extention function sqlGetRestultsExt to help with testing and generally getting better error info out of mysql
• src/hg/utils/automation/makePushQSql.pl
  • 1.27 lines changed: 3, context: html, text, full: html, text
    migrate to new mysqlbeta db server
• src/inc/apacheLog.h
  • 1.2 lines changed: 2, context: html, text, full: html, text
    somebody not me forgot to check in the .h file
• src/utils/qa/weeklybld/buildEnv.csh
  • 1.75 lines changed: 3, context: html, text, full: html, text
    v214 final build
• src/utils/qa/weeklybld/makeUserApps.csh
  • 1.4 lines changed: 4, context: html, text, full: html, text
    trying to get clean