kent: changes by commit

review to branch (2009-08-25 to 2009-09-02) v214

• Added -bed option
  • src/utils/twoBitToFa/twoBitToFa.c 1.13 - lines changed: 67, context: html, text, full: html, text
• Checking for zero chromosome coordinate (supposed to be 1-based coordinates)
  • src/lib/apacheLog.c 1.2 - lines changed: 15, context: html, text, full: html, text
  • src/lib/bigBed.c 1.21 - lines changed: 20, context: html, text, full: html, text
  • src/lib/bwgCreate.c 1.14 - lines changed: 9, context: html, text, full: html, text
• Making zero coordinate error message handle negative coords too.
  • src/lib/bwgCreate.c 1.15 - lines changed: 2, context: html, text, full: html, text
• Testing strptime function.
  • src/hg/oneShot/freen/freen.c 1.88 - lines changed: 10, context: html, text, full: html, text
• Adding more time parsing.
  • src/lib/apacheLog.c 1.3 - lines changed: 8, context: html, text, full: html, text
• Making it accept times in seconds or microseconds.
  • src/lib/apacheLog.c 1.4 - lines changed: 7, context: html, text, full: html, text
• Updating runTime to be milliseconds not seconds in comment.
  • src/inc/apacheLog.h 1.3 - lines changed: 1, context: html, text, full: html, text