jzhu: changes by file

branch to review (2009-08-18 to 2009-08-25) v213

• src/hg/instinct/hgHeatmap2/drawingCode.c
  • 1.69 lines changed: 27, context: html, text, full: html, text
    fix bug find to draw overlaping probes not just within probes when drawing heatmap, summary view
• src/hg/instinct/hgHeatmap2/hgHeatmap2.c
  • 1.77 lines changed: 9, context: html, text, full: html, text
    add patient id to tooltip
• src/hg/instinct/hgHeatmap2/hgHeatmap2.h
  • 1.49 lines changed: 2, context: html, text, full: html, text
    add patient id to tooltip
• src/hg/instinct/hgHeatmap2/hgToolTip.c
  • 1.9 lines changed: 26, context: html, text, full: html, text
    add patient id to tooltip
• src/hg/instinct/hgHeatmap2/hgHeatmapData/columnDb.instinct.ra
  • 1.1 lines changed: 1023, context: html, text, full: html, text
    add columnDb.instinct.ra
• src/hg/instinct/hgHeatmap2/hgHeatmapData/columnDb.ra
  • 1.6 lines changed: 1019, context: html, text, full: html, text
    remove columnDb.ra
• src/hg/instinct/hgHeatmap2/hgHeatmapData/columnDb_intgenGBMBio.ra
  • 1.2 lines changed: 178, context: html, text, full: html, text
    clean up GBM columnDB ra file
• src/hg/instinct/hgHeatmap2/hgHeatmapData/columnDb_intgenMinOVBio.ra
  • 1.2 lines changed: 27, context: html, text, full: html, text
    clean up intgenMinOVBio.ra
• src/hg/instinct/hgHeatmap2/hgHeatmapData/columnDb_intgenOVBio.ra
  • 1.9 lines changed: 14, context: html, text, full: html, text
    fix bug/typo in columnDB_intgenOVBio.ra
  • 1.7 lines changed: 138, context: html, text, full: html, text
    modify ovarian columnDB ra file
• src/hg/instinct/hgHeatmap2/hgHeatmapData/columnDb_lajos.ra
  • 1.4 lines changed: 10, context: html, text, full: html, text
    modify columnDB_lajos.ra
• src/hg/instinct/hgHeatmap2/hgHeatmapData/datasets.TCGAcontrol.ra
  • 1.16 lines changed: 2, context: html, text, full: html, text
    add downsample table for segmented CGH data
  • 1.15 lines changed: 23, context: html, text, full: html, text
    add Broad Affy U133A Tumor vs. Normal set
  • 1.14 lines changed: 558, context: html, text, full: html, text
    clean up TCGA dataset.ra file
• src/hg/instinct/hgHeatmap2/hgHeatmapData/datasets.instinct.ra
  • 1.6 lines changed: 10, context: html, text, full: html, text
    add columnDb.instinct.ra
• src/hg/instinct/hgHeatmap2/hgHeatmapFrontend/js/hgHeatmap.js
  • 1.73 lines changed: 2, context: html, text, full: html, text
    add patient id to tooltip
• src/hg/instinct/lib/hgHeatmapLib.c
  • 1.61 lines changed: 19, context: html, text, full: html, text
    fix bug find all overlaping probes not just within probes to draw heatmap, summary view
• src/hg/makeDb/hgCgiData/Human/microarrayGroups.ra
  • 1.82 lines changed: 4, context: html, text, full: html, text
    update microArray ra file for Broad Affy U133A Tumor vs. Normal