src/hg/encode/encodeValidate/doEncodeValidate.pl 1.193

Index: src/hg/encode/encodeValidate/doEncodeValidate.pl
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/encodeValidate/doEncodeValidate.pl,v
retrieving revision 1.192
retrieving revision 1.193
diff -b -B -U 4 -r1.192 -r1.193
--- src/hg/encode/encodeValidate/doEncodeValidate.pl	3 Sep 2009 22:20:55 -0000	1.192
+++ src/hg/encode/encodeValidate/doEncodeValidate.pl	10 Sep 2009 23:16:15 -0000	1.193
@@ -675,9 +675,9 @@
 # This is like tag align but with two additional sequence fields appended; seq1 and seq2
 {
     my ($path, $file, $type) = @_;
     # validate chroms, chromSize, etc. Assume hg18 like elsewhere
-    my $paramList = validationSettings("validateFiles","pairedTagAlign");
+    my $paramList = validationSettings("validateFiles","pairedTagAlign",$assembly);
     my $safe = SafePipe->new(CMDS => ["validateFiles $paramList $quickOpt -chromDb=hg18 -type=pairedTagAlign $file"]);
     if(my $err = $safe->exec()) {
 	print STDERR  "ERROR: failed validatePairedTagAlign : " . $safe->stderr() . "\n";
 	# don't show end-user pipe error(s)