src/hg/makeDb/doc/hg18.txt 1.382
1.382 2009/09/15 06:59:00 markd
updated lsSnpPdb
Index: src/hg/makeDb/doc/hg18.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/hg18.txt,v
retrieving revision 1.381
retrieving revision 1.382
diff -b -B -U 4 -r1.381 -r1.382
--- src/hg/makeDb/doc/hg18.txt 9 Sep 2009 18:13:50 -0000 1.381
+++ src/hg/makeDb/doc/hg18.txt 15 Sep 2009 06:59:00 -0000 1.382
@@ -28778,5 +28778,17 @@
hgsql -e 'drop table vegaPep;' hg18
hgPepPred hg18 tab vegaPep vegaPepOnlyInGtp.hg18.fa.tab
-############################################################################
+#############################################################################
+# lsSnpPdb: import of LS-SNP/PDB data for SNP 130 (2009-02-02 markd)
+ # down load from JHU
+ ssh genbank
+ sudo su - genbank
+ cd /cluster/data/genbank
+ ./bin/lsSnpPdbDownloadStep hg18
+ # load into hgwdev database
+ ssh hgwdev
+ cd /cluster/data/genbank
+ ./bin/lsSnpPdbDbLoadStep hg18
+ # once this has been QAed, will auto-update from genbank scripts
+#############################################################################