src/hg/makeDb/doc/hg18.txt 1.382

1.382 2009/09/15 06:59:00 markd
updated lsSnpPdb
Index: src/hg/makeDb/doc/hg18.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/hg18.txt,v
retrieving revision 1.381
retrieving revision 1.382
diff -b -B -U 4 -r1.381 -r1.382
--- src/hg/makeDb/doc/hg18.txt	9 Sep 2009 18:13:50 -0000	1.381
+++ src/hg/makeDb/doc/hg18.txt	15 Sep 2009 06:59:00 -0000	1.382
@@ -28778,5 +28778,17 @@
  
     hgsql -e 'drop table vegaPep;' hg18
     hgPepPred hg18 tab vegaPep vegaPepOnlyInGtp.hg18.fa.tab    
 
-############################################################################
+#############################################################################
+# lsSnpPdb: import of LS-SNP/PDB data for SNP 130 (2009-02-02 markd)
+    # down load from JHU
+    ssh genbank
+    sudo su - genbank
+    cd /cluster/data/genbank
+    ./bin/lsSnpPdbDownloadStep hg18
+    # load into hgwdev database
+    ssh hgwdev
+    cd /cluster/data/genbank
+    ./bin/lsSnpPdbDbLoadStep hg18
+    # once this has been QAed, will auto-update from genbank scripts
+#############################################################################