angie: changes by commit
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review to branch (2009-09-09 to 2009-09-15) v215
- Added bamFileNameFromTable to bamFile.h and changed bamFetch to take a filename, not db+table, so it can be used for CT files someday. bamFileNameFromTable supports an optional seqName column in the db table, for per-chrom BAM files (as we get from 1000Genomes).
- src/hg/hgTracks/bamTrack.c 1.9 - lines changed: 2, context: html, text, full: html, text
- src/hg/hgc/bamClick.c 1.8 - lines changed: 3, context: html, text, full: html, text
- src/hg/inc/bamFile.h 1.8 - lines changed: 9, context: html, text, full: html, text
- src/hg/lib/bamFile.c 1.7 - lines changed: 31, context: html, text, full: html, text
- Added chr21 to bamNA12878 -- remote access to 1000Genomes DCC using (for now) samtools' support for FTP.
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.417 - lines changed: 1, context: html, text, full: html, text
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