markd: changes by file

review to branch (2009-09-09 to 2009-09-15) v215

• src/hg/inc/jksql.h
  • 1.85 lines changed: 3, context: html, text, full: html, text
    added function to get list of profile names for Fan
• src/hg/lib/jksql.c
  • 1.135 lines changed: 13, context: html, text, full: html, text
    added function to get list of profile names for Fan
• src/hg/makeDb/doc/hg18.txt
  • 1.382 lines changed: 13, context: html, text, full: html, text
    updated lsSnpPdb
• src/hg/makeDb/genbank/makefile
  • 1.16 lines changed: 6, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/genbank/doc/to-do.txt
  • 1.118 lines changed: 4, context: html, text, full: html, text
    added refseq problem
  • 1.117 lines changed: 3, context: html, text, full: html, text
    added to-do item
• src/hg/makeDb/genbank/etc/genbank.tbls
  • 1.13 lines changed: 3, context: html, text, full: html, text
    added ccds tables to genbank table list (thanks B0b)
• src/hg/makeDb/genbank/etc/hgdownload.crontab
  • 1.20 lines changed: 4, context: html, text, full: html, text
    changed frequence of hgdownload rsync to reduce number of email messages
• src/hg/makeDb/genbank/src/makefile
  • 1.11 lines changed: 2, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/genbank/src/ccds/ccdsImportStep
  • 1.2 lines changed: 1, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/genbank/src/dbload/gbBuildState.c
  • 1.31 lines changed: 2, context: html, text, full: html, text
    change maxShrinkage safety net minimum size
• src/hg/makeDb/genbank/src/lib/gbCommon.pm
  • 1.48 lines changed: 7, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/genbank/src/lsSnpPdb/lsSnpPdbDbLoadStep
  • 1.1 lines changed: 60, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/genbank/src/lsSnpPdb/lsSnpPdbDownloadStep
  • 1.1 lines changed: 63, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/genbank/src/lsSnpPdb/makefile
  • 1.1 lines changed: 10, context: html, text, full: html, text
    added scripts for auto update lsSnpPdb
• src/hg/makeDb/outside/hgLsSnpPdbLoad/hgLsSnpPdbLoad.c
  • 1.4 lines changed: 27, context: html, text, full: html, text
    allow loading from compressed files