src/hg/instinct/bioInt2/bioPathway.h 1.2

1.2 2009/09/05 01:12:01 sbenz
Added em to pipeline
Index: src/hg/instinct/bioInt2/bioPathway.h
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/instinct/bioInt2/bioPathway.h,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 4 -r1.1 -r1.2
--- src/hg/instinct/bioInt2/bioPathway.h	1 Sep 2009 05:18:02 -0000	1.1
+++ src/hg/instinct/bioInt2/bioPathway.h	5 Sep 2009 01:12:01 -0000	1.2
@@ -22,15 +22,22 @@
     char *type;
     char *name;
 };
 
+// more compact way to pass around em parameters
+struct emParams {
+	double mRNA[3][3];
+	double genome[3][3];
+};
+
 struct pathwayData {
     int id;
     struct entities *entities;
     struct links *links;
     
     struct slPair *data;
     struct hash *featureIds;
+	struct emParams *emParameters;
 };
 
 struct analysisVals *readAnalysisValsFromFile(char *filename, 
 					      struct entities *enList, int sample_id);