src/hg/makeDb/doc/canFam2.txt 1.24
1.24 2009/09/09 01:52:24 aamp
Small note about creating monDom5 chains/nets (swapped) on canFam2.
Index: src/hg/makeDb/doc/canFam2.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/canFam2.txt,v
retrieving revision 1.23
retrieving revision 1.24
diff -b -B -U 4 -r1.23 -r1.24
--- src/hg/makeDb/doc/canFam2.txt 9 Sep 2009 01:46:17 -0000 1.23
+++ src/hg/makeDb/doc/canFam2.txt 9 Sep 2009 01:52:24 -0000 1.24
@@ -2955,8 +2955,16 @@
# DO BLASTZ SWAP TO CREATE CANFAM2 CHAINS, NETS, AXNET, MAFNET AND
# ALIGNMENT DOWNLOADS ON DANRER5 - documented in danRer5.txt
##########################################################
+# monDom5 chains/nets (2009-03-02 Andy)
+
+ssh hgwdev
+cd /hive/data/genomes/monDom5/bed/blastz.canFam2
+doBlastzChainNet.pl -swap DEF
+## (should have also put in a -noLoadChainSplit... see below)
+
+##########################################################
# monDom5 chain table unsplit (2009-09-08 Andy)
ssh hgwdev
cd /hive/data/genomes/canFam2/bed/blastz.monDom5.swap/axtChain