src/hg/lib/cddInfo.sql 1.1
1.1 2009/09/02 23:55:50 holmes
Adding coverage and percent positive
Index: src/hg/lib/cddInfo.sql
===================================================================
RCS file: src/hg/lib/cddInfo.sql
diff -N src/hg/lib/cddInfo.sql
--- /dev/null 1 Jan 1970 00:00:00 -0000
+++ src/hg/lib/cddInfo.sql 2 Sep 2009 23:55:50 -0000 1.1
@@ -0,0 +1,21 @@
+# cddInfo.sql was originally generated by the autoSql program, which also
+# generated cddInfo.c and cddInfo.h. This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly
+# automatic way.
+
+#Conserved Domain Description
+CREATE TABLE cddInfo (
+ chrom varchar(255) not null, # chromosome
+ chromStart int unsigned not null, # Start position in chromosome
+ chromEnd int unsigned not null, # End position in chromosome
+ name varchar(255) not null, # hit name
+ score int unsigned not null, # Score from 900-1000. 1000 is best
+ strand char(1) not null, # Value should be + or -
+ fullname varchar(255) not null, # standard name
+ NCBInum varchar(255) not null, # NCBI Identifier
+ evalue double not null, # Expect value
+ percentlength int unsigned not null, # Data source
+ percentident int unsigned not null, # Data source
+ #Indices
+ PRIMARY KEY(chrom, chromStart, chromEnd, name)
+);