src/utils/bigBedSummary/bigBedSummary.c 1.7

Index: src/utils/bigBedSummary/bigBedSummary.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/bigBedSummary/bigBedSummary.c,v
retrieving revision 1.6
retrieving revision 1.7
diff -b -B -U 4 -r1.6 -r1.7
--- src/utils/bigBedSummary/bigBedSummary.c	9 Jun 2009 17:41:28 -0000	1.6
+++ src/utils/bigBedSummary/bigBedSummary.c	8 Sep 2009 19:50:24 -0000	1.7
@@ -5,8 +5,9 @@
 #include "options.h"
 #include "sqlNum.h"
 #include "bigBed.h"
 #include "asParse.h"
+#include "udc.h"
 
 static char const rcsid[] = "$Id$";
 
 char *summaryType = "coverage";
@@ -28,14 +29,16 @@
   "         max - maximum depth of covered regions\n"
   "   -fields - print out information on fields in file.\n"
   "      If fields option is used, the chrom, start, end, dataPoints\n"
   "      parameters may be omitted\n"
+  "   -udcDir=/dir/to/cache - place to put cache for remote bigBed/bigWigs\n"
   );
 }
 
 static struct optionSpec options[] = {
    {"type", OPTION_STRING},
    {"fields", OPTION_BOOLEAN},
+   {"udcDir", OPTION_STRING},
    {NULL, 0},
 };
 
 void bigBedSummary(char *fileName, char *chrom, int start, int end, int dataPoints)
@@ -95,8 +98,9 @@
 int main(int argc, char *argv[])
 /* Process command line. */
 {
 optionInit(&argc, argv, options);
+udcSetDefaultDir(optionVal("udcDir", udcDefaultDir()));
 if (optionExists("fields"))
     {
     if (argc < 2)
         usage();